SRV (state-free reversible ## VAMP (Variational approach for Marokov process)

Concept

Numerical Examples

1. Double-Gyre System
2. Stochastic Lorenz Systema

Paper

• Wu, Hao, and Frank Noé. “Variational approach for learning Markov processes from time series data.” Journal of Nonlinear Science 30.1 (2020): 23-66.[BibTex]

Code

• markovmodel/PyEMMA VAMPnets)

Results

1. 1D 4-well potential
2. Ring potential
3. Alanine dipeptide

Paper

• Chen, Wei, Hythem Sidky, and Andrew L. Ferguson. “Nonlinear discovery of slow molecular modes using state-free reversible VAMPnets.” The Journal of chemical physics 150.21 (2019): 214114.[BibTex]

Code

• origin hsidky/srv